BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031B08LP1|AL429342
(551 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig327 594 e-170
>3x_Contig327
Length = 1076
Score = 594 bits (289), Expect = e-170
Identities = 293/297 (98%)
Strand = Plus / Plus
Query: 249 tttaatataaataacataatatgatttatgtttatgtaaagtacaatctaaattaaattt 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tttaatataaataacataatatgatttatgtttatgtaaagtacaatctaaattaaattt 439
Query: 309 aatttttaaaatattaataaaataaattaattctttaatagtatatgattgtmaatttaa 368
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 440 aatttttaaaatattaataaaataaattaattctttaatagtatatgattgtaaatttaa 499
Query: 369 tgtaatacctccacctttattaaatgaaccatctcctataataatatgagctaatgattc 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgtaatacctccacctttattaaatgaaccatctcctataataatatgagctaatgattc 559
Query: 429 ataatttaataaatcatataamtcatttggtataattttyactctaccattataaaamtg 488
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||
Sbjct: 560 ataatttaataaatcatataaatcatttggtataatttttactctaccattataaaaatg 619
Query: 489 atgtcttaatttagtaaaacaaggtaaagctatagtagttatttcaactccataata 545
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atgtcttaatttagtaaaacaaggtaaagctatagtagttatttcaactccataata 676
Score = 300 bits (146), Expect = 2e-81
Identities = 168/178 (94%), Gaps = 1/178 (0%)
Strand = Plus / Plus
Query: 8 cctatataaattctaattwatatatataggatttctctcgagtttgcttcttaatatata 67
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 cctatataaattctaatttatatatataggatttctctcgagtttgcttcttaatatata 195
Query: 68 aattatatatatattatstagbbyatatatattacnncgcggattcatattatgaatccg 127
||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||
Sbjct: 196 aattatatatatattatatagattatatatattaccccgcggattcatattatgaatccg 255
Query: 128 cgggattatattatcttattattatatttmtcatatttttgtaataatttatatycaa 185
|||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 256 cgggattatattat-ttattattatatttatcatatttttgtaataatttatattcaa 312
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.716 1.34
Gapped
Lambda K H
1.42 0.716 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6917
Number of Sequences: 1807
Number of extensions: 6917
Number of successful extensions: 194
Number of sequences better than 1.0e-20: 1
length of query: 551
length of database: 10,358,551
effective HSP length: 16
effective length of query: 535
effective length of database: 10,329,639
effective search space: 5526356865
effective search space used: 5526356865
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.8 bits)
S1: 11 (23.1 bits)
S2: 48 (99.1 bits)